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Withholding Taxes in Indonesia Explained for Startups and Growing Companies

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Tony Rianto

  10 mins
September 24, 2025

When we were competing with two other headhunting firms for a VP of Product role at a leading health tech company, the final candidate asked pointed questions about the company's financial governance during the interview process.

While we had presented only 5 carefully selected candidates throughout the search, this particular candidate—who had multiple competing offers—made it clear that tax compliance and operational maturity were decisive factors in his decision.

His concerns weren't unfounded: in Indonesia's competitive tech talent market, senior executives increasingly view withholding tax compliance as a signal of company stability and readiness to scale.

withholding taxes

Key Takeaways:

  • Withholding tax is not an additional tax but a government mechanism to collect income tax in advance.
  • Compliance signals operational maturity to investors and executive hires, reducing risk.
  • Key withholding taxes that companies must manage include employee salaries (PPh 21), vendor payments (PPh 23), non-resident payments (PPh 26), and certain final tax transactions (PPh 4(2)).
  • Non-compliance can lead to tax liabilities and penalties, disrupting cash flow.
  • Effective tax management builds trust and supports smoother scaling.

What Withholding Taxes Are and Why They Matter for Startups

In my 7+ years in executive recruitment, I've seen that a company's financial discipline is key to its employer brand. Withholding tax isn't an extra business tax; it's a system where the government requires you, the payer, to withhold tax from certain payments—like salaries or vendor fees—and remit it directly to the state treasury.

Why the Government Requires This System

For founders who need to understand the logic, the withholding tax system is a safeguard for the government. It ensures a steady, predictable flow of revenue throughout the calendar year instead of waiting for annual tax returns. More importantly, it significantly reduces the risk of tax evasion by placing the collection responsibility on the business making the payment. For a startup, this means you are an essential part of the national tax collection framework. The government is requiring payment from you on behalf of your payees, and fulfilling this role demonstrates credibility.

Startups vs. Corporations: A Different Reality

What I've learned from working with Indonesian market leaders is that while the rules apply to all, managing them differs greatly. Large companies have dedicated finance teams, but startups often rely on founders or small teams juggling many tasks. Errors are more likely, but the consequences of non-compliance remain severe. Investors and senior hires look for startups with solid operational foundations from the start.

Key Types of Withholding Taxes in Indonesia Affecting Growing Companies

Navigating the different types of withholding tax can seem complex, but most growing companies deal with a few key categories. Understanding your obligations is crucial for building a compliant operation. A study on startup tax compliance highlights that clarity in tax provisions significantly helps corporate taxpayers fulfill their income tax duties (Panduwinata, Sidharta, & Simanjuntak, 2022).

Employee Salaries (PPh Pasal 21)

This is the most common form of withholding. As an employer, you are required to calculate and withhold income tax from your employees' salaries each month, and this can also apply to severance payments paid upon termination. The employer withholds a certain percentage based on a progressive income tax rate applied to their gross income. Offering a compliant payroll system where employees pay the correct tax is a sign of a stable and trustworthy employer.

Contractor and Vendor Payments (PPh Pasal 23)

When your startup pays for services from other resident companies or freelancers—such as marketing, IT, or consulting services—that income paid is often subject to withholding. The withholding tax rate for these services is typically a set percentage. The tax withheld for such payment must be reported, as this applies to a wide range of professional services, and failing to do so can create a future tax liability.

Dividends, Interest, and Royalties (PPh Pasal 4(2), 23, or 26)

For investor-backed startups, this is vital. When you pay dividends, interest on loans, or royalties for intellectual property, these payments are subject to tax withholding. The specific tax rate can vary, and sometimes it's a final tax, meaning no additional tax is due on that income. This final income tax simplifies the process but must be applied correctly. Getting this wrong can create serious issues with your investors and damage your credibility.

Non-Resident Payments (PPh Pasal 26)

If you work with foreign companies or individuals (non-residents), the rules change. Payments for services, dividends, interest, and royalties sent abroad are subject to a different withholding tax rate, often 20%. This can be reduced if a tax treaty exists between Indonesia and the recipient's country. Understanding how to apply the terms of a tax treaty is critical for any company operating internationally, as it directly impacts your contracts with foreign persons and entities.

Compliance Requirements Every Startup Should Know

From my experience closing complex searches, operational details can make or break a company's reputation. Tax compliance is not just about paying; it’s about following a process. Your company must obtain a Taxpayer Identification Number (NPWP) as soon as it’s legally established.

Delaying this can lead to penalties. Taxes withheld from payments in one month are due by the 10th of the following month, with tax returns filed by the 20th. Missing these deadlines can incur penalties, including 2% monthly interest on unpaid tax.

Common Mistakes Startups Make

What most recruiters miss is the pattern of simple errors that can snowball into major problems. Here are a few common pitfalls I've seen:

  • Misclassifying Workers: Startups often confuse full-time employees with independent contractors. Each has different withholding rules, and mistakes can lead to back taxes and penalties.
  • Forgetting One-Off Payments: It's easy to remember withholding for regular payroll, but founders often overlook one-off payments like royalties, freelance work, or special consulting services, which are usually subject to withholding.
  • Ignoring Payments in Kind: Providing non-cash benefits to employees can sometimes be considered income and may have tax implications that are often overlooked.
  • Poor Record-Keeping: Failing to issue and store official proof of withholding (bukti potong) for every payment can turn a routine tax audit into a nightmare.

Recent research from a large experiment with Indonesian small businesses found that enforcement messages from the tax authority significantly increased filing rates and monthly tax payments.

Each dollar spent on deterrence letters generated about US$30 in additional tax revenue over a year, showing that compliance is closely monitored (Dong, Satyadini, & Sinning, 2025).

Strategic Impact of Withholding Taxes on Scaling and Funding

The real challenge for founders isn't just the rules—it's understanding how those rules impact your business strategy. Withholding taxes aren’t just compliance; they’re part of your startup’s investment readiness scorecard.

From a cash flow perspective, the money you withhold must be managed carefully. It's not your working capital; it's a liability you owe to the government. If you deduct Rp 50 million in taxes from salaries and vendor payments in a month, that Rp 50 million must be set aside. Treating it as available cash can create a sudden and severe shortfall when it's time to make the payment to the state treasury.

More importantly, investors scrutinize tax compliance during due diligence. A clean tax record is a sign of good governance and low risk. Any red flags can delay or even derail a funding round. This extends to talent acquisition as well.

When we approached the Health Tech VP of Product search, we were competing with two other firms. The candidate we placed asked pointed questions about the company's financial governance. Our client’s clean record was a major factor in building trust and closing the deal.

How Startups Can Manage Withholding Taxes Effectively

So, how can a growing company manage this without an army of accountants? Many clients find success by building systems, not just reacting to deadlines. Using modern payroll and accounting software designed for Indonesia can automate calculations and track withholding payments, reducing errors and ensuring a clear audit trail.

Hiring the right advisors is also key—early on, a reliable tax consultant can set up your systems, and as you scale, their guidance becomes invaluable, especially with complex transactions like those in fintech.

A Founder's Monthly Compliance Checklist

To make it practical, here's a simple checklist to follow every month:

  1. Review all payments: Before the 5th of the month, list every payment made in the previous month to employees, contractors, and other companies.
  2. Calculate and verify: For each payment, calculate the correct tax to be withheld based on the relevant tax rate and rules. Double-check your calculations.
  3. Pay the tax: Remit the total withheld amount to the state treasury via the designated e-billing system by the 10th.
  4. File the tax return: Prepare and file the consolidated monthly tax return (SPT Masa Unifikasi) electronically by the 20th.
  5. Issue proof: Generate and send the official withholding tax slips (bukti potong) to the respective payees.

Future Outlook and Staying Ahead of Tax Regulations

Tax governance is now a competitive edge. What works in Singapore doesn't always translate to Jakarta, and staying ahead of local trends is crucial. Startups that show maturity in compliance win faster investor trust.

Trends: Digital Tax Reporting and Automation

The Indonesian Directorate General of Taxes (DGT) is aggressively pursuing digitalization. This means more integrated online systems for filing and payment, which can simplify the process for compliant companies.

However, it also means greater data transparency for the government body, making it easier for them to detect discrepancies and non-compliance automatically. Startups must embrace these digital tools to stay efficient and avoid scrutiny.

Evolving Investor Expectations Around Financial Governance

What I've learned from working with venture capital and private equity-backed companies is that investor expectations now go beyond a strong pitch deck. Due diligence is deeper, and a history of late filings or penalties signals poor internal controls and raises major red flags.

Why Tax Compliance Is a Competitive Edge

As Indonesia continues to attract foreign investment and becomes a hub for regional talent, companies with impeccable compliance records will stand out. They will be seen as safer investments, more reliable partners, and more trustworthy employers. This advantage will be critical in securing funding, attracting top executive talent, and building a sustainable business in an increasingly competitive market.

Turning Compliance into a Growth Enabler

Looking back on that challenging F&B search, the solution wasn’t a better candidate but helping the client improve their compliance. Once resolved, they appeared more stable and attractive, allowing us to fill the role with a strategic leader who transformed their marketing.

Withholding taxes in Indonesia are more than legal hurdles—they’re essential for building a scalable, investable business. Early compliance attracts top investors, retains talent, and supports responsible growth. For hiring managers facing similar challenges, we offer complimentary consultations.

Frequently Asked Questions

What is the first step for a new startup to become tax compliant in Indonesia?

The absolute first step is to obtain a Taxpayer Identification Number (NPWP) for your company as soon as it is legally registered. This identification number is required for all tax-related activities, from withholding taxes on employee salaries to filing your annual corporate tax return. Without it, you cannot legally operate or fulfill any tax obligations.

How much should a startup budget for tax compliance services?

There's no single answer, as it depends on your company's complexity, transaction volume, and number of employees. A good starting point is to allocate a budget for a monthly retainer with a reputable tax consultant. This ensures your withholding and filing obligations are met correctly from day one, preventing a larger tax liability later.

How does poor tax compliance affect my ability to hire senior executives?

From my experience, top-tier candidates view a company's compliance record as a reflection of its stability and integrity. During late-stage interviews for senior roles, it's not uncommon for candidates to ask about financial governance. Any sign of disorganization or non-compliance is a major red flag that can cause your ideal candidate to lose trust and walk away from an offer.

You might also like: Payroll Outsourcing Services Explained for Businesses in Indonesia


The article was written by:
Tony Rianto
September 24, 2025
CEO & Founder
Tony has 10+ years of experience in recruitment and founded Luminare Consulting to deliver service excellence beyond traditional hiring. Luminare takes a highly consultative approach, enabling the team to deeply understand each client’s needs and the pain points behind every vacancy. This allows us to identify and present spot-on candidates who go beyond the job description—ensuring the right fit for both the role and the organization’s long-term success.

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